A study of animal action segmentation algorithms across supervised, unsupervised, and semi-supervised learning paradigms
Blau A, Schaffer ES, Mishra N, Miska NJ, The International Brain Laboratory, Paninski L, Whiteway MR (2024) arXiv.
Behavioral fingerprinting of the naked mole-rat uncovers signatures of eusociality and social touch
Schwark R, Ogundare S, Weinreb C, Sheng P, Foster W, Toussaint A, Chang P, Tsai W, Comfere M, Arnold A, Guadagnino A, McCloskey D, Schaffer ES, Rajan K, Datta SR, Abdus-Saboor I (2024) bioRxiv
Multi-modal Gaussian Process Variational Autoencoders for Neural and Behavioral Data
Gondur R, Bin Sikandar U, Schaffer ES, Aoi MC, Keeley SL (2024) ICLR
The Brain in Silico and Nature: How AI is Transforming Neuroscience
Schaffer ES, Gu X, Crary JF, Balchandani P, Rapoport BI (2023) Frontiers of Medical Research: Artificial Intelligence
The spatial and temporal structure of neural activity across the fly brain
Schaffer ES, Mishra N, Whiteway MR, Li W, Vancura MB, Freedman J, Patel KB, Voleti V, Paninski L, Hillman EMC, Abbott LF, Axel R (2023) Nature Communications
Semi-supervised sequence modeling for improved behavioral segmentation
Whiteway MR, Schaffer ES, Wu A, Buchanan EK, Onder OF, Mishra N, Paninski L (2021) bioRxiv
Deep Graph Pose: A semi-supervised deep graphical model for improved animal pose tracking
Wu A, Buchanan EK, Whiteway M, Schartner M, Meijer G, Noel JP, Rodriguez E, Everett C, Norovich A, Schaffer ES, Mishra N, Salzman CD, Angelaki D, Bendesky A, Cunningham J, Paninski L (2020) Advances in Neural Information Processing Systems
Odor Perception on the Two Sides of the Brain: Consistency Despite Randomness
Schaffer ES, Stettler DD, Kato D, Choi GB, Axel R, Abbott LF (2018) Neuron
SCAPE Microscopy for High Speed, 3D Whole-Brain Imaging in Drosophila melanogaster
Li W, Voleti V, Schaffer ES, Vaadia R, Grueber WB, Mann RS, Hillman E (2016) Optics and the Brain
A complex-valued firing-rate model that approximates the dynamics of spiking networks
Schaffer ES, Ostojic S, Abbott LF (2013) PLoS Computational Biology
Inhibitory stabilization of the cortical network underlies visual surround suppression
Ozeki H, Finn IM, Schaffer ES, Miller KD, Ferster D (2009) Neuron
The perception of linear self-motion
Durgin FH, Fox LF, Schaffer ES, Whitaker R (2005) Human Vision and Electronic Imaging X